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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23842119_23842615_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

23842119 - 23842615

Intron Length:

497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

GCATGTGTCTAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

CTGTACTGAACT

Flanking Amino Acid:

GMGTPTVVASDLGTPDGIAF

Intron Amino Acid Position:

2454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.8

82.4

29.8

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

53.6

0.08

1.1

55.6

43.6

Minor 5ss

36.2

-1.6

2.6

40.7

39.2

Minor BPS

62.6

0.47

1.7

77.96

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007973

23796334 - 23898319

101986