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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23851039_23852583_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23851039 - 23852583

Intron Length:

1545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

CAGTTGCTAATT

Flanking Amino Acid:

VAVHPIKQPHGINSCESSPC

Intron Amino Acid Position:

1690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

44.4

-0.3

2.3

60.73

43.6

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007973

23796334 - 23898319

101986