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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23857874_23859505_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23857874 - 23859505

Intron Length:

1632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

GTCACTGTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AGTGTCTGAACT

Flanking Amino Acid:

CNDHSDETDCPTRPPGMCHQ

Intron Amino Acid Position:

1213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.3

78.4

37.9

Major BPS

73.8

0.59

0.9

26.8

Major PPT

68.8

0.42

65.4

40.9

Minor 5ss

41.2

-1

2.8

41.5

Minor BPS

61.5

0.44

1.6

75.81

40.6

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017639

23857467 - 23898319

40853

ENSAPLT00000007973

23796334 - 23898319

101986