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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23859623_23860003_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23859623 - 23860003

Intron Length:

381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

TTTTATTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

CVDGADEHDCIYNCSATEFK

Intron Amino Acid Position:

1174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.6

34.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.7

0.89

0.7

89.1

27.3

Minor 5ss

38.5

-1.3

3.3

54.7

43.6

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017639

23857467 - 23898319

40853

ENSAPLT00000007973

23796334 - 23898319

101986