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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23861017_23862198_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23861017 - 23862198

Intron Length:

1182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTATTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

NSDEQNCGSLNNTCSSSAFT

Intron Amino Acid Position:

1054

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.6

0.87

0.7

89.7

25.7

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017639

23857467 - 23898319

40853

ENSAPLT00000007973

23796334 - 23898319

101986