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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23862481_23863391_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23862481 - 23863391

Intron Length:

911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

ATCACTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TTCTCTATCACT

Flanking Amino Acid:

VKAYDAHSQIGSNYCNRGTN

Intron Amino Acid Position:

960

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

73.7

33.1

Major BPS

74.9

0.62

81.3

29.9

Major PPT

68.7

0.42

1.1

71.6

37.7

Minor 5ss

38.7

-1.3

2.9

47.9

47.8

Minor BPS

56.7

0.29

80.33

41.9

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007973

23796334 - 23898319

101986

ENSAPLT00000017639

23857467 - 23898319

40853