Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_23863530_23864237_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23863530 - 23864237

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TCTTTCAAAACA

Flanking Amino Acid:

THPFGLTIFGGYAYFTDWRL

Intron Amino Acid Position:

914

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.8

81.8

38.5

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

71.2

0.48

67.4

36.9

Minor 5ss

37.8

-1.4

49.5

46.7

Minor BPS

55.3

0.16

71.45

40.9

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017639

23857467 - 23898319

40853

ENSAPLT00000007973

23796334 - 23898319

101986