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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23866514_23867414_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23866514 - 23867414

Intron Length:

901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGTAAA

U12 Branch Point Sequence:

AAGGCTGTATCT

Flanking Amino Acid:

DLHIDGQHCVAVQQFLLFSS

Intron Amino Acid Position:

696

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

51.3

0.03

1.3

53.4

40.4

Major PPT

0.97

0.6

88.6

20.7

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

43.2

-0.4

2.2

58.71

44.8

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007973

23796334 - 23898319

101986