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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23870298_23871131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23870298 - 23871131

Intron Length:

834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TCTTTCTTTATA

Flanking Amino Acid:

PRGIALDPTVGYLFFSDWDS

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.6

32.8

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

88.1

0.86

0.6

24.2

Minor 5ss

31.6

-2.1

3.1

31.7

42.6

Minor BPS

66.2

0.5

1.6

74.21

37.7

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007973

23796334 - 23898319

101986