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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23871356_23873639_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23871356 - 23873639

Intron Length:

2284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTATTGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

GTATTGATAATA

Flanking Amino Acid:

IFWTDTVQDKVFSINIDGSD

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

83.2

30.8

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

77.6

0.62

73.7

41.5

Minor 5ss

32.5

-2

3.1

41.3

45.3

Minor BPS

46.6

-0.2

2.2

61.44

38.7

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017639

23857467 - 23898319

40853

ENSAPLT00000007973

23796334 - 23898319

101986