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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23873810_23875345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23873810 - 23875345

Intron Length:

1536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

TAGTCATTTATT

Flanking Amino Acid:

HHRHCRANTSAGVASIIFSN

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

32.9

Major BPS

0.67

1.1

77.7

37.1

Major PPT

79.3

0.66

0.8

75.9

32.7

Minor 5ss

29.3

-2.4

2.9

33.7

41.5

Minor BPS

55.3

0.25

1.9

74.22

42.7

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017639

23857467 - 23898319

40853

ENSAPLT00000007973

23796334 - 23898319

101986