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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23875475_23878424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23875475 - 23878424

Intron Length:

2950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTCACTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

GTTCACTTAACA

Flanking Amino Acid:

ISSNDSRTCIDFDDCKMWGV

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

78.6

0.71

78.6

Major PPT

71.8

0.49

39.4

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

0.69

1.5

79.36

35.9

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007973

23796334 - 23898319

101986

ENSAPLT00000017639

23857467 - 23898319

40853