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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23878545_23879910_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

23878545 - 23879910

Intron Length:

1366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAGTATGT

5'SS Class:

weak_major

3'SS Sequence:

ATTTCCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TATTTCTGAACT

Flanking Amino Acid:

DETNITAGRHYISHCAALSC

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.1

1.2

49.5

41.9

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

83.8

0.76

0.7

29.1

Minor 5ss

41.2

-1

3.5

65.4

45.8

Minor BPS

77.3

0.94

1.3

90.1

33.2

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017639

23857467 - 23898319

40853

ENSAPLT00000007973

23796334 - 23898319

101986