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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23880052_23881149_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23880052 - 23881149

Intron Length:

1098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TATTCCTCAATT

Flanking Amino Acid:

CEDNEDERGCESGHHECYPG

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

0.86

0.6

83.6

24.7

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

77.4

0.94

1.4

89.86

34.1

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017639

23857467 - 23898319

40853

ENSAPLT00000007973

23796334 - 23898319

101986