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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23881267_23882415_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23881267 - 23882415

Intron Length:

1149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTATGAGGG

5'SS Class:

major

3'SS Sequence:

TTCCTTTCCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AGTACATGGATT

Flanking Amino Acid:

CGDRSDENSCTYATCRGNFF

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.8

0.25

1.1

47.5

41.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

80.7

0.69

0.7

80.7

24.5

Minor 5ss

38.1

-1.3

3.4

45.8

Minor BPS

47.2

-0.1

1.8

65.22

38.7

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017639

23857467 - 23898319

40853

ENSAPLT00000007973

23796334 - 23898319

101986