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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23889482_23892041_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23889482 - 23892041

Intron Length:

2560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTC|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

CTGTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

AACTCATGAATG

Flanking Amino Acid:

EDGSDEHQQCPGRTCSSQQF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

83.5

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

85.6

0.8

80.6

31.4

Minor 5ss

43.2

-0.7

2.9

61.1

37.5

Minor BPS

-0.2

1.8

53.36

41.3

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017639

23857467 - 23898319

40853

ENSAPLT00000007973

23796334 - 23898319

101986