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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23964720_23969170_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

23964720 - 23969170

Intron Length:

4451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAATCAAG

5'SS Class:

weak_major

3'SS Sequence:

AAAAATTAAGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TAAAAATTAAGC

Flanking Amino Acid:

VYLLQGSFLKHAIDFYTLSC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.8

0.23

1.1

55.7

43.1

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

51.8

0.04

1.1

45.4

44.6

Minor 5ss

-1

2.9

54.4

43.7

Minor BPS

45.3

-0.3

56.05

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034878

23964601 - 23969444

4844