Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_23974669_23975527_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

23974669 - 23975527

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCCTAC

5'SS Class:

weak_minor

3'SS Sequence:

TTTTCTTTTTCAG|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

GAAATCATAACC

Flanking Amino Acid:

RLFTSVIAVHRAYETSKMYR

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

39.7

Major BPS

71.6

0.54

33.1

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

70.2

0.68

1.9

40.1

Minor BPS

50.8

1.6

59.28

38.6

Associated Gene:

Gene:

KLHL41

Ensembl Gene ID:

ENSAPLG00000007022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007300

23971395 - 23981854

10460

ENSAPLT00000045038

23971395 - 23981854

10460

ENSAPLT00000038420

23971395 - 23990453

19059

ENSAPLT00000019732

23971395 - 23990453

19059