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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24052867_24053541_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24052867 - 24053541

Intron Length:

675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTACTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TCATGTTCTACT

Flanking Amino Acid:

LRREADAETSRLVQEHQDKA

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

38.1

Major BPS

72.5

0.56

1.2

63.4

Major PPT

80.5

0.69

0.9

74.6

34.9

Minor 5ss

38.2

-1.3

3.1

49.4

46.8

Minor BPS

-0.3

2.2

64.53

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017849

24049471 - 24054640

5170

ENSAPLT00000033802

24047111 - 24054640

7530

ENSAPLT00000031749

24047111 - 24055199

8089