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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24053682_24054358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24053682 - 24054358

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTATTTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TTCTATTTAAAC

Flanking Amino Acid:

EKLELQRQHHEHVAEQKVIK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

83.5

27.9

Major BPS

79.5

0.73

0.9

36.9

Major PPT

73.2

0.52

69.9

39.4

Minor 5ss

38.5

-1.3

2.8

50.4

39.3

Minor BPS

63.4

0.4

1.6

72.42

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033802

24047111 - 24054640

7530

ENSAPLT00000031749

24047111 - 24055199

8089

ENSAPLT00000017849

24049471 - 24054640

5170