Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_24069134_24070610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24069134 - 24070610

Intron Length:

1477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTAAG

5'SS Class:

strong_major

3'SS Sequence:

ACACTGTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

GTGACTTTCACA

Flanking Amino Acid:

KWVPIANMIKGVGNATACVL

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

78.1

38.2

Major BPS

77.7

0.69

30.2

Major PPT

64.1

0.32

1.1

56.8

42.7

Minor 5ss

-1.8

2.9

41.6

Minor BPS

0.12

1.8

64.51

Associated Gene:

Gene:

KLHL23

Ensembl Gene ID:

ENSAPLG00000006271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006492

24067544 - 24071635

4092