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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24077947_24078163_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24077947 - 24078163

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

CATTCTGTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TCGGCATTAACT

Flanking Amino Acid:

YKDTELIVLFKEEYCTKKNE

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

74.4

Major BPS

85.7

0.89

0.8

22.2

Major PPT

67.4

0.39

1.1

67.4

37.8

Minor 5ss

36.2

-1.6

2.9

37.7

Minor BPS

63.1

0.49

1.8

76.77

45.6

Associated Gene:

Gene:

SSB

Ensembl Gene ID:

ENSAPLG00000006109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006362

24075636 - 24080724

5089