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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24123174_24123252_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24123174 - 24123252

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

AACTACTAAACA

Flanking Amino Acid:

MIDPDIYLLQVCASRLDPDY

Intron Amino Acid Position:

689

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

90.7

21.1

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

0.76

0.7

79.5

26.1

Minor 5ss

47.8

-0.2

2.8

67.5

37.3

Minor BPS

53.8

0.11

1.9

63.99

Associated Gene:

Gene:

UBR3

Ensembl Gene ID:

ENSAPLG00000005734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025218

24085452 - 24187524

102073

ENSAPLT00000005959

24085452 - 24187249

101798