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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24142661_24143131_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24142661 - 24143131

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAATG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTATACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

TTTTCTGTATAC

Flanking Amino Acid:

GLVVLLQASSVLGQCRNSTE

Intron Amino Acid Position:

1233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

77.2

37.7

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

81.7

0.71

0.9

76.6

36.7

Minor 5ss

43.2

-0.7

2.9

57.1

47.2

Minor BPS

49.1

-0

2.3

71.15

40.4

Associated Gene:

Gene:

UBR3

Ensembl Gene ID:

ENSAPLG00000005734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005959

24085452 - 24187249

101798

ENSAPLT00000025218

24085452 - 24187524

102073