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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24143266_24145430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24143266 - 24145430

Intron Length:

2165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GATTGTTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTCTTACTT

Flanking Amino Acid:

LTTLQRYFKDSSCLQAVSIG

Intron Amino Acid Position:

1278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

76.6

0.6

0.9

73.8

41.4

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

75.4

0.88

1.5

91.07

32.9

Associated Gene:

Gene:

UBR3

Ensembl Gene ID:

ENSAPLG00000005734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005959

24085452 - 24187249

101798

ENSAPLT00000025218

24085452 - 24187524

102073