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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24145542_24147630_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24145542 - 24147630

Intron Length:

2089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TTCAGCTACATT

Flanking Amino Acid:

CHKSYMESLRNDQVLQGFSV

Intron Amino Acid Position:

1315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

83.2

30.8

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

87.8

0.85

0.6

81.5

30.6

Minor 5ss

34.6

-1.8

2.7

41.5

Minor BPS

42.5

-0.5

2.4

63.64

47.2

Associated Gene:

Gene:

UBR3

Ensembl Gene ID:

ENSAPLG00000005734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025218

24085452 - 24187524

102073

ENSAPLT00000005959

24085452 - 24187249

101798