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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24154349_24164595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24154349 - 24164595

Intron Length:

10247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCAATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTGTATATAATA

Flanking Amino Acid:

ASTAGKRSCLNQLFHVLAMH

Intron Amino Acid Position:

1460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

90.7

21.1

Major BPS

0.75

78.6

Major PPT

80.6

0.69

0.8

77.2

35.6

Minor 5ss

47.8

-0.2

2.8

67.5

37.3

Minor BPS

54.6

0.14

1.8

68.99

37.6

Associated Gene:

Gene:

UBR3

Ensembl Gene ID:

ENSAPLG00000005734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025218

24085452 - 24187524

102073

ENSAPLT00000005959

24085452 - 24187249

101798