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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24164702_24171171_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24164702 - 24171171

Intron Length:

6470

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGA|GCAAGTATT

5'SS Class:

major

3'SS Sequence:

GTTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

AATTAAGTAATC

Flanking Amino Acid:

LTQPMQDKNPELISEELPEV

Intron Amino Acid Position:

1495

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.3

85.3

31.5

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

88.9

0.88

0.7

36.6

Minor 5ss

32.6

-2

47.9

41.8

Minor BPS

45.1

-0.3

2.3

60.4

38.4

Associated Gene:

Gene:

UBR3

Ensembl Gene ID:

ENSAPLG00000005734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025218

24085452 - 24187524

102073

ENSAPLT00000005959

24085452 - 24187249

101798