Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_24182967_24184690_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24182967 - 24184690

Intron Length:

1724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAGC

5'SS Class:

strong_major

3'SS Sequence:

ATCTTCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTGTTCTTATCT

Flanking Amino Acid:

FAERHPDQVKALLIQEPKWD

Intron Amino Acid Position:

1703

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.9

36.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.5

0.64

0.8

70.5

35.7

Minor 5ss

42.2

-0.9

2.5

54.4

42.8

Minor BPS

0.8

1.5

87.26

38.7

Associated Gene:

Gene:

UBR3

Ensembl Gene ID:

ENSAPLG00000005734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005959

24085452 - 24187249

101798

ENSAPLT00000025218

24085452 - 24187524

102073