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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24226914_24230243_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
24226914 - 24230243

Intron Length:
3330

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAATGACC

5'SS Class:
major

3'SS Sequence:
TGTTTTATTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTGAA

U12 Branch Point Sequence:
ATGTGTTTTATT

Flanking Amino Acid:
TEGGVKLVDFGVSAQLTSTR

Intron Amino Acid Position:
163

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.2
0.52
1.1
65.1
38.8

Major BPS
78.4
0.71
0.9
69.4
37.7

Major PPT
86.7
0.83
0.8
81.8
34.6

Minor 5ss
33.7
-1.9
3.1
41.5
39.1

Minor BPS
49
0
2
69.26
42.8

Associated Gene:

Gene:
MYO3B

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

24222363 - 24394079
171717