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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24230321_24242622_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
24230321 - 24242622

Intron Length:
12302

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGGCAAA

5'SS Class:
strong_major

3'SS Sequence:
TTTTTGCTGATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGTTAAT

U12 Branch Point Sequence:
TTTTTGCTGATA

Flanking Amino Acid:
VGTPFWMAPEVIACEQQYDY

Intron Amino Acid Position:
189

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.2
0.74
1
74.1
38.3

Major BPS
66.6
0.41
1.4
69.7
44.2

Major PPT
75.9
0.58
1
73.1
37.4

Minor 5ss
37.3
-1.4
3.1
47.6
48.1

Minor BPS
47.9
-0.1
2.3
70.16
36.3

Associated Gene:

Gene:
MYO3B

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

24222363 - 24394079
171717