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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24265845_24278014_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
24265845 - 24278014

Intron Length:
12170

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTGAGTTTT

5'SS Class:
major

3'SS Sequence:
TTCTCTGTCACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATAACAT

U12 Branch Point Sequence:
TTCTCTGTCACA

Flanking Amino Acid:
WCRGFNHFISQCLIKDFEKR

Intron Amino Acid Position:
259

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.4
0.6
1
78
32.5

Major BPS
62.2
0.3
1.1
69.4
35.8

Major PPT
80.3
0.68
0.8
75.3
33.2

Minor 5ss
42.9
-0.8
3
63.8
41.6

Minor BPS
49.4
-0
2.4
70.26
42.8

Associated Gene:

Gene:
MYO3B

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

24222363 - 24394079
171717