Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_24295429_24295834_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24295429 - 24295834

Intron Length:

406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

TTTTTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

CTTTATATAAAT

Flanking Amino Acid:

LEKSRVIKQAVGEKNFHIFY

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

74.4

36.1

Major BPS

79.2

0.73

75.3

39.4

Major PPT

91.8

0.94

0.7

84.6

Minor 5ss

38.3

-1.3

3.3

49.9

46.4

Minor BPS

51.7

0.13

1.9

75.16

41.2

Associated Gene:

Gene:

MYO3B

Ensembl Gene ID:

ENSAPLG00000005409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005580

24222363 - 24394079

171717