Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_24298892_24299135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24298892 - 24299135

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

GGTAACTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

ACTTGTTCAATA

Flanking Amino Acid:

FNQHIFALEQMEYQSEGIDA

Intron Amino Acid Position:

747

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

69.8

0.49

70.3

31.8

Major PPT

66.4

0.37

58.7

42.6

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

49.2

-0

1.9

61.26

39.8

Associated Gene:

Gene:

MYO3B

Ensembl Gene ID:

ENSAPLG00000005409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005580

24222363 - 24394079

171717