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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24465121_24466398_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24465121 - 24466398

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGGTTTT

5'SS Class:

major

3'SS Sequence:

CGTTCATTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTCATTCATT

Flanking Amino Acid:

NKDGDGIFSPGGAISNMYSI

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

76.6

34.9

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

75.3

0.57

0.9

68.5

36.3

Minor 5ss

39.4

-1.2

3.3

54.1

45.6

Minor BPS

59.7

0.38

80.74

41.5

Associated Gene:

Gene:

GAD1

Ensembl Gene ID:

ENSAPLG00000005082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005303

24458368 - 24476445

18078