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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24473759_24474426_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24473759 - 24474426

Intron Length:

668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GTTTGGTTATTC

Flanking Amino Acid:

EEFEMVFEGEPEHTNVCFWY

Intron Amino Acid Position:

477

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

89.4

0.89

0.7

84.7

29.3

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

44.8

-0.4

2.5

62.5

43.5

Associated Gene:

Gene:

GAD1

Ensembl Gene ID:

ENSAPLG00000005082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005303

24458368 - 24476445

18078