Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_24633791_24634378_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24633791 - 24634378

Intron Length:

588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACACAC

5'SS Class:

major

3'SS Sequence:

CTCACGATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTATATTAACT

Flanking Amino Acid:

GSDATYRILEVGCGAGNSVF

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

40.1

Major BPS

79.2

0.73

75.3

39.4

Major PPT

66.3

0.37

0.9

62.3

38.4

Minor 5ss

37.8

-1.4

3.1

50.8

45.8

Minor BPS

72.2

0.77

1.6

89.87

33.6

Associated Gene:

Gene:

METTL8

Ensembl Gene ID:

ENSAPLG00000004140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022331

24625603 - 24649631

24029

ENSAPLT00000004255

24625603 - 24649631

24029

ENSAPLT00000028393

24621531 - 24649023

27493