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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24642416_24646309_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
24642416 - 24646309

Intron Length:
3894

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATGAGAA

5'SS Class:
strong_major

3'SS Sequence:
ATTGTGTTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTGTAAT

U12 Branch Point Sequence:
TTTGGGTTAATT

Flanking Amino Acid:
MRSLNKMNFIT

Intron Amino Acid Position:
2

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.3
0.78
0.9
73
31.2

Major BPS
72.1
0.55
1.2
73.3
39.1

Major PPT
81
0.7
0.9
77.4
41.2

Minor 5ss
35.8
-1.6
3.3
46.4
48.9

Minor BPS
50.3
0.09
2.5
79.08
43.9

Associated Gene:

Gene:
METTL8

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

24621531 - 24649023
27493

24625603 - 24649631
24029