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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24646391_24648917_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
24646391 - 24648917

Intron Length:
2527

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAATGTGG

5'SS Class:
major

3'SS Sequence:
TTTTTATTTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TATTAATTAAAA

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.8
0.42
1.1
54.1
45.4

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
94.3
1
0.6
93.1
23.6

Minor 5ss
35.8
-1.6
3.2
38.3
46.7

Minor BPS
57.7
0.24
1.9
72.88
37.8

Associated Gene:

Gene:
METTL8

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

24621531 - 24649023
27493

24625603 - 24649631
24029