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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24649024_24649324_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
24649024 - 24649324

Intron Length:
301

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTGAGGGCC

5'SS Class:
major

3'SS Sequence:
TTTATATTTTTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTATAT

U12 Branch Point Sequence:
TTATCTTTATAT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.2
0.59
1
62.8
37.8

Major BPS
79.2
0.73
1
75.3
39.4

Major PPT
83.7
0.76
0.8
82.2
34.4

Minor 5ss
25.5
-2.8
3.4
34
41.8

Minor BPS
65.1
0.55
1.7
82.13
39.1

Associated Gene:

Gene:
METTL8

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

24625603 - 24649631
24029

24625603 - 24649631
24029