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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24677706_24684701_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24677706 - 24684701

Intron Length:

6996

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGCGTGGG

5'SS Class:

major

3'SS Sequence:

CTTCTTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

TAAGGCATAACA

Flanking Amino Acid:

VTGFVFIQGIAIIVYRLPWT

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

54.6

44.5

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

85.5

0.8

0.6

84.9

22.8

Minor 5ss

26.1

-2.8

3.2

31.1

42.9

Minor BPS

-0.1

2.1

62.5

43.2

Associated Gene:

Gene:

CYBRD1

Ensembl Gene ID:

ENSAPLG00000003893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003992

24677201 - 24688100

10900