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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24714572_24716117_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
24714572 - 24716117

Intron Length:
1546

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCC|GTAAGTCTC

5'SS Class:
major

3'SS Sequence:
CTGTGTTGATCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTATGAT

U12 Branch Point Sequence:
TCTGTGTTGATC

Flanking Amino Acid:
KECGAAAGAPPVSAMSDKSE

Intron Amino Acid Position:
168

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.7
0.47
1.3
67.4
44

Major BPS
66.9
0.42
1.3
59.7
46.7

Major PPT
66.6
0.37
1.1
66
44.2

Minor 5ss
40.6
-1
3
58.3
39.3

Minor BPS
47.2
-0.2
2.1
59.94
40.6

Associated Gene:

Gene:
DYNC1I2

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

24714069 - 24741633
27565

24714069 - 24741633
27565