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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_24735335_24736296_F

Intron Information:

Intron Rank:
10
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
24735335 - 24736296
Intron Length:
962

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTATGATTC
5'SS Class:
strong_major
3'SS Sequence:
TTTTTCCTTTCAG|T
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TAGTTAT
U12 Branch Point Sequence:
ATTTGTGTATTT
Flanking Amino Acid:
TTPEYVFHCQSAVMSATFAK
Intron Amino Acid Position:
495

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
84.7
0.82
0.9
77.7
31.3
Major BPS
73.5
0.58
1.2
63.7
43.9
Major PPT
94.5
1
0.5
93.1
16
Minor 5ss
48.6
-0.1
2.8
67.6
43.7
Minor BPS
44.2
-0.3
2.4
69.31
42.7

Associated Gene:

Gene:
DYNC1I2
Ensembl Gene ID:
ENSAPLG00000003249
Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000023208
24714069 - 24741633
27565
ENSAPLT00000003393
24714069 - 24741633
27565