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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_24736882_24737210_F

Intron Information:

Intron Rank:
12
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
24736882 - 24737210
Intron Length:
329

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAAGATAA
5'SS Class:
strong_major
3'SS Sequence:
ATTTTCACTACAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTAAA
U12 Branch Point Sequence:
TTATTTTTAAAA
Flanking Amino Acid:
WSLDMLSQPQDSMELVHKQS
Intron Amino Acid Position:
582

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
92.2
0.99
0.8
83
23.8
Major BPS
90.4
1
0.7
90.2
19.3
Major PPT
81.3
0.71
0.8
74.7
34.3
Minor 5ss
37.3
-1.4
3
46.9
48.4
Minor BPS
71.1
0.66
1.3
76.99
33.4

Associated Gene:

Gene:
DYNC1I2
Ensembl Gene ID:
ENSAPLG00000003249
Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000023208
24714069 - 24741633
27565
ENSAPLT00000003393
24714069 - 24741633
27565