About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_24738508_24739139_F


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
24738508 - 24739139

Intron Length:
632

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACTGAA

5'SS Class:
strong_major

3'SS Sequence:
GCTTTTTTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTACAT

U12 Branch Point Sequence:
ATTGCATTACAT

Flanking Amino Acid:
DWTVKLWTTKNNKPLYSFED

Intron Amino Acid Position:
675

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.7
0.77
1.1
77.6
32.8

Major BPS
73.9
0.59
1
81
30.2

Major PPT
89.7
0.89
0.7
87.9
29.4

Minor 5ss
37.5
-1.4
3.2
49
47.2

Minor BPS
48.9
0
2.1
72.89
43.5

Associated Gene:

Gene:
DYNC1I2

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

24714069 - 24741633
27565

24714069 - 24741633
27565