About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_24759364_24759555_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
24759364 - 24759555

Intron Length:
192

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTACGTATC

5'SS Class:
major

3'SS Sequence:
GTATCTTCATTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATTTAT

U12 Branch Point Sequence:
ATAACTTTAAAC

Flanking Amino Acid:
VAPEKAIKLTVNDFVRDKFT

Intron Amino Acid Position:
410

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.6
0.41
1.2
69.7
41

Major BPS
79.9
0.74
0.9
69.7
37.1

Major PPT
68.2
0.41
0.9
67.7
38.7

Minor 5ss
42.1
-0.9
3.1
64
40.4

Minor BPS
63.1
0.39
1.4
68.06
36.7

Associated Gene:

Gene:
SLC25A12

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

24745893 - 24795436
49544