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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24852014_24855421_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24852014 - 24855421

Intron Length:

3408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGATT

5'SS Class:

strong_major

3'SS Sequence:

TTTGATATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GCTTTTTTAACA

Flanking Amino Acid:

VLLLAGKGLKVGMTTEEIDS

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

84.4

Major BPS

87.3

0.93

0.8

36.5

Major PPT

77.4

0.62

0.9

74.9

39.5

Minor 5ss

38.3

-1.3

3.4

57.5

46.8

Minor BPS

74.2

0.75

1.1

75.16

36.6

Associated Gene:

Gene:

METAP1D

Ensembl Gene ID:

ENSAPLG00000002546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002575

24822735 - 24869619

46885