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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24860045_24868032_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24860045 - 24868032

Intron Length:

7988

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TGCTCCCTCACA

Flanking Amino Acid:

APFSVIGNTISLVAQRGGFQ

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.9

81.8

38.5

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

76.2

0.59

0.8

69.5

31.3

Minor 5ss

43.8

-0.7

3.2

64.9

46.4

Minor BPS

53.2

0.09

2.1

68.79

43.3

Associated Gene:

Gene:

METAP1D

Ensembl Gene ID:

ENSAPLG00000002546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002575

24822735 - 24869619

46885