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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24868323_24869107_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24868323 - 24869107

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAGAA

U12 Branch Point Sequence:

TTCCTTGTTACA

Flanking Amino Acid:

LMEEGMAFTIEPIIMEGSPE

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

1.1

84.4

27.7

Major BPS

54.8

0.12

1.2

52.7

43.2

Major PPT

84.3

0.77

0.8

79.1

32.9

Minor 5ss

31.4

-2.1

2.4

41.4

Minor BPS

44.5

-0.4

2.2

59.5

40.6

Associated Gene:

Gene:

METAP1D

Ensembl Gene ID:

ENSAPLG00000002546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002575

24822735 - 24869619

46885