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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24963600_24981004_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24963600 - 24981004

Intron Length:

17405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

TCTTTCCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

ATCCCTTGAAAT

Flanking Amino Acid:

HWQLQPQERRLLLVGAPREK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

72.2

37.5

Major BPS

0.45

57.8

Major PPT

86.6

0.82

0.7

80.8

24.7

Minor 5ss

38.2

-1.3

3.4

60.6

43.7

Minor BPS

54.6

0.22

1.6

70.22

40.3

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044420

24963351 - 25004015

40665

ENSAPLT00000016338

24963351 - 25004136

40786